CDS

Accession Number TCMCG057C25093
gbkey CDS
Protein Id XP_018432592.1
Location join(19172194..19172243,19172339..19172483,19172556..19172839,19172932..19173028,19173142..19173247,19173338..19173420,19173508..19173653,19173770..19173875,19174030..19174089,19174210..19174226,19174357..19174431,19174768..19174921,19175105..19175388,19175468..19175564,19175650..19175755,19175837..19175919,19176016..19176152,19176234..19176339,19176465..19176524,19176636..19176656)
Gene LOC108805122
GeneID 108805122
Organism Raphanus sativus

Protein

Length 738aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018577090.1
Definition PREDICTED: tyrosine--tRNA ligase 2, cytoplasmic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R02918        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K01866        [VIEW IN KEGG]
EC 6.1.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004831        [VIEW IN EMBL-EBI]
GO:0004832        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006438        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGCTTCTTCCGACAATGCACCACCAACTCAGGCTTCCGTAATACAGATAAGCGAGGAAAGATTCAACCTAGTTAAAAGTGTTGGCGAGCAATGCACACATGATGATGAGCTGAGAGATCTTCTGGCTAACAAGGCTGCTCCTGTTTGCTACGACGGTTTTGAACCGTCTGGAAGGATGCATATCGCTCAGGGACTGATGAAGATCATGAGTGTGAACAAATTGACTTCTGCTGGTTGCCGAGTGAAGATCTGGATTGCAGATTGGTTTGCGTACATGAACAACAAGCTGGGAGGTGATTTGAAGAAAATCAGAGTGGTTGGAGAATATTTCAAGGAGATCTTTCTGGCCGCCGGGATGAACAGTGAGAATGTGGAGTTTCTGTGGTCATCCGAAGAGATTAATGCTAGGGGAGATGAGTACTGGCCTCTTGTCATGGACATTGCCTGCAGAAACAGTCTCGCCAAAATAAAACGGTGTATGCCTATTATGGGTCATAGTGAGACCGAGGAGCTGAGTGCAGCTCACATTCTGTACGTGTGTATGCAATGTGCGGATACCCTTTTCCTTGAGGCTGATATTTGCCAGCTTGGGATGGATCAGGAATCAGTCAATCTGCTGGCAAGAGACTATTGTGATGACACTCAGAGAGGAAGCAAACCTGTCATCTTGTCTCACCATATGATTTCTGGTCTTCAACAAGGGCAGACAAAGATGTCTAAAAGTGATCCTTCATCTGCCATCTTCATGGAAGATGAGGAGGCTGAAGTTAATGTGAAGATAAAGAAAGCTTACTGCCCTCCGGAGATTGTGGAAGGTAACCCATGCGTGGAATACGTCAGATACATCATTCTACCCTGGTTCGGTGAATTCACAGTAGAGCGAGACGAGAAGTATGGCGGTAAAAAGACCTACAAAAGCTTTGAAGACATTGTCACTGACTATGAGAGCAGTGACTTGCACCCTAAGGATCTGAAGGACGCTCTGTCGAAAGCATTGAATAAGATACTGCAACCTGTCCGTGATCATTTCAAAACCAATAGTCGTGCCAAGAATCTGCTAAAACAGGTCAAGGGCTACAAAATCACCAGAACGGCTCTATCCAAGGAGATGGAGGCTCTTTCCATCAACGCACCAAACCCAGTATCTTCAGCTGCCGGCTTACAGATGAGCGAGGAGGTCGAGAAAAAATACAATATAGTGAGGAGTATTGGCGAGGAGTGCATACAAGAGGATGAACTAAAGAACCTGTTAGCCAAGAAGCCCACTCCGATCTGCTATGATGGATTTGAACCATCGGGAAGGATGCACATTGCCCAGGGAGTGATGAAAGTCACCAATGTGAACAAGCTGACGTCAGCTGGCTGCCACGTGAAAATTTGGATTGCAGATTGGTTTGCTCAGCTGAACAACAAGTTGGGAGGTGACTTGGAGAGAATAAAAGTGGTTGGAGAATACTTCAAGGAGATTTGGCAAGCTGGTGGTATGAACACCGACAAAGTAGGGTTTCTTTGGGCTTCAGACGAAATTAATGGTAGAGGCGGTAAGTATTGGCCTCTTGTGATGGACATTGCTCGCAGAAACAACCTCCGTCGAATCTTGAGGTGTGGGCAGATCATGGGACGTAGTGAGACAGAGGTGCTGAGTGCAGCGCAAATTCTTTACCCTTGTATGCAGTGTGCGGATATTTTCTTACTGGAGGCTGATATTTGCCAGCTGGGGATGGATCAGAGGAAAGTAAACATGTTAGCAAGAGAATACTGTGATGACATTAAGAGAAAGAACAAACCCATCATCTTGTCCCACCATATGCTTCCTGGTCTTCAACAAGGACAAGAGAAGATGTCCAAAAGTAATCCATCATCTGCCATATTTATGGAAGATGAGGAGGCTGATGTTAGTGAGAAGATCAGCCAAGCTTATTGCCCACCAAGAACCGTGGAAGGCAATCCATGTCTTGAATACGTCAAATACTTAGTTCTACCTCGATTCAATGAGTTCAAGGTTGAATTTGATGGCGGTAACAAGACCTTCAAAAGCTTTGAAGATATTTGTGCTGACTACGAGAGCGGCGAGTTGGCTCCTGAAGATCTTAAGAAAGCCTTGGTGAAAGCATTGAATATAATGCTGCAACCTGTTCGTGATCACTTCAAAACCAACGAGCGTGCCAAAAATCTACTGGAACAGGTCAAGGCTTTTAGAGTCACCAGGTGA
Protein:  
MEASSDNAPPTQASVIQISEERFNLVKSVGEQCTHDDELRDLLANKAAPVCYDGFEPSGRMHIAQGLMKIMSVNKLTSAGCRVKIWIADWFAYMNNKLGGDLKKIRVVGEYFKEIFLAAGMNSENVEFLWSSEEINARGDEYWPLVMDIACRNSLAKIKRCMPIMGHSETEELSAAHILYVCMQCADTLFLEADICQLGMDQESVNLLARDYCDDTQRGSKPVILSHHMISGLQQGQTKMSKSDPSSAIFMEDEEAEVNVKIKKAYCPPEIVEGNPCVEYVRYIILPWFGEFTVERDEKYGGKKTYKSFEDIVTDYESSDLHPKDLKDALSKALNKILQPVRDHFKTNSRAKNLLKQVKGYKITRTALSKEMEALSINAPNPVSSAAGLQMSEEVEKKYNIVRSIGEECIQEDELKNLLAKKPTPICYDGFEPSGRMHIAQGVMKVTNVNKLTSAGCHVKIWIADWFAQLNNKLGGDLERIKVVGEYFKEIWQAGGMNTDKVGFLWASDEINGRGGKYWPLVMDIARRNNLRRILRCGQIMGRSETEVLSAAQILYPCMQCADIFLLEADICQLGMDQRKVNMLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSNPSSAIFMEDEEADVSEKISQAYCPPRTVEGNPCLEYVKYLVLPRFNEFKVEFDGGNKTFKSFEDICADYESGELAPEDLKKALVKALNIMLQPVRDHFKTNERAKNLLEQVKAFRVTR